Biomedical Ίδρυμα Ιατροβιολογικών Ερευνών, Ακαδημίας ΑθηνώνΑκαδημία Αθηνών
Επιστημονικό Προσωπικό

Εμμανουήλ Εμμανουήλ Αθανασιάδης, PhD
Ειδικός Λειτουργικός Επιστήμονας Β'

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Βιολογίας Συστημάτων

Επιλεγμένες Δημοσιεύσεις

Analysis of endothelial-to-haematopoietic transition at the single cell level identifies cell cycle regulation as a driver of differentiation, Giovanni C, Athanasiadis E, et al. Genome Biology, 21, 157, 2020, DOI: 10.1101/2020.04.03.023762

ChemBioServer 2.0: An advanced web server for filtering, clustering and networking of chemical compounds facilitating both drug discovery and repurposing, Karatzas E*, Zamora JE*, Athanasiadis E, et al., Bioinformatics, btz97, 2020, DOI:10.1093/bioinformatics/btz976, *Equal First Authors

Single-cell transcriptional analysis reveals ILC-like cells in zebrafish, Hernández P*, Strzelecka P*, Athanasiadis E*, et al. Science immunology, Volume 3, Issue 29, eaau5265, 2018, DOI:10.1126/sciimmunol.aau5265 *Equal First Authors

Single-cell RNA-Sequencing uncovers transcriptional states and fate decisions in haematopoiesis, Athanasiadis E et al. Nature Communications, Volume 8, Issue 1, 2045, 2017, DOI:10.1038/s41467-017-02305-6

D-Map: Random walking on gene network inference maps towards differential avenue discovery, Athanasiadis E, et al. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 14, Issue 2, Pages 484-490, 2017, DOI:10.1109/TCBB.2016.2535267

CD4-transgenic zebrafish reveal tissue-resident Th2- and regulatory T cell-like populations and diverse mononuclear phagocytes, Dee C*, Nagaraju R*, Athanasiadis E, et al. Journal of Immunology, Volume 197, Issue 9, Pages 3520-3530, 2016, DOI: 10.4049/jimmunol.1600959 – *Equal First Authors  **Cover Page

Discovering gene re-ranking efficiency and conserved gene-gene relationships derived from gene co-expression network analysis on breast cancer data, Bourdakou M, Athanasiadis E, et al. Scientific Reports, Volume 19, Issue 6, Pages 20518, 2016, DOI:10.1038/srep20518

Bioinformatics methods in drug repurposing for Alzheimer’s disease, Siavelis J, Bourdakou M, Athanasiadis E, et al. Briefings in Bioinformatics, Volume 17, Issue 2, Pages 322-35, 2016, DOI:10.1093/bib/bbv048

ZoomOut: Analyzing multiple networks as single nodes, Athanasiadis E, et al. IEEE/ACM Transactions on Computational Biology and Bioinformatics, Volume 12, Pages 1213-1216, 2015, DOI: 1109/TCBB.2015.2424411

A database of genetic association studies in melanoma using network-driven data exploration tools. Athanasiadis E, et al. Database, Volume 2014, bau101, 2014, DOI:10.1093/database/bau101

BiDaS: a web-based Monte Carlo BioData Simulator based on sequence/feature characteristics.  Paraskevopoulou M*, Vlachos I*, Athanasiadis E, et al. Nucleic Acids Research, Volume 41, Issue W1, Pages W582-586, 2013, DOI:10.1093%2Fnar%2Fgkt420, *Equal First Authors

ChemBioServer: A web-based pipeline for filtering, clustering and visualization of chemical compounds used in drug discovery, Athanasiadis E, et al. Bioinformatics, Volume 28, Issue 22, Pages 3002-3003, 2012, DOI: 10.1093/bioinformatics/bts551


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