Publications

Publications from collaborative studies

Roubelakis MG, Bitsika V, Zagoura D, Trohatou O, Pappa KI, Makridakis M, Antsaklis A, Vlahou A, Anagnou NP. In vitro and in vivo properties of distinct populations of amniotic fluid mesenchymal progenitor cells. J Cell Mol Med. 2010 Sep 27. doi: 10.1111/j.1582-4934.2010.01176.x. [Epub ahead of print]

Schiffer E, Vlahou A, Petrolekas A, Stravodimos K, Tauber R, Geschwend JE, Neuhaus J, Stolzenburg JU, Conaway MR, Mischak H, Theodorescu D.
Prediction of Muscle-invasive Bladder Cancer Using Urinary Proteomics.
Clin Cancer Res. (2009), 15 (15), 4935-4943.

Pampalakis G, Prosnikli E, Agalioti T, Vlahou A, Zoumpourlis V, Sotiropoulou G.
A tumor-protective role for human kallikrein-related peptidase 6 in breast cancer mediated by inhibition of epithelial-to-mesenchymal transition. Cancer Res. (2009) 69(9):3779-87.

Tsagkrasoulis D, Zerefos P, Loudos G, Vlahou A, Baumann M, Kossida S.
Brukin2D': a 2D visualization and comparison tool for LC-MS data.
BMC Bioinformatics. 2009 ; 10 Suppl 6:S12.

Giannopoulou EG, Garbis SD, Vlahou A, Kossida S, Lepouras G, Manolakos ES.
Proteomic feature maps: a new visualization approach in proteomics analysis.
J Biomed Inform. 2009 ;42(4):644-53.

Karamessinis PM, Malamitsi-Puchner A, Boutsikou T, Makridakis M, Vougas K, Fountoulakis M, Vlahou A, Chrousos G.  Marked defects in the expression and glycosylation of alpha2-HS glycoprotein/fetuin-A in plasma from neonates with intrauterine growth restriction: proteomics screening and potential clinical implications. Mol Cell Proteomics. (2008) 7(3):591-9.

Roudelakis, MG, Pappa KI, Bitsika V, Zagoura D, Vlahou A, Antsaklis A, Papadaki H and Anagnou NP.  Isolation, phenotypic, molecular and proteomic characterization of human mesenchymal stem cells (MSCs) derived from amniotic fluid: comparison to bone marrow MSCs. Stem Cells and Development (2007) 16(6):931-52.

Tsangaris, G.T., Botsonis, A., Politis, I. and Tzortzatou-Stathopoulou, F. (2004). Cadmium induces Fas downregulation in a human immature T-cell line. Cancer Genomics and Proteomics, 1: 77-86.

Fountoulakis, M., Tsangaris, G.T., Oh, J., Maris, A. and Lubec, G. (2004). Protein profile of the HeLa cell line. Journal of Chromatography A, 1038: 247-265.

Kolialexi, A., Tsangaris, G.T., Antsaklis, A. and Mavrou, A. (2004).Rapid clearance of fetal cells from maternal circulation after delivery. Annals of  New York  Academy of Sciences, 1022: 113-118.

Kolialexi, A., Tsangaris, G.T., Antsaklis, A. and Mavrou, A. (2004). Fetal cells in maternal plasma are found in a late state of apoptosis. Prenatal Diagnosis, 24 (9): 719-721.

Miller, I., Friedlein, A., Tsangaris, G.T., Maris. A., Fountoulakis, M., Gemeiner, M. (2004). The serum proteome of Equus caballus. Proteomics, 4 (10): 3227-34.

Kitsiou-Tzeli, S., Kolialexi, A., Fryssira, H., Galla-Voumvouraki, A., Salavoura, K., Kanariou, M., Tsangaris, G.T., Kanavakis E and Mavrou, A. (2004). Detection of 22q11.2 deletion among 139 patients with Di George/ Velocardiofacial syndrome features. IN VIVO, 18 (5): 603-608.

Kolialexi, A., Tsangaris, G.T., Antsaklis, A., Kitsiou-Tzeli, S. and Mavrou, A. (2004). Use of annexin V for the identification of fetal cells in maternal circulation. IN VIVO, 18(5): 629-632.

Touliatou, V., Kolialexi, A., Tsangaris, G.T., Moschovi, M., Polychronopoulou, S.,and Mavrou, A. (2004). Conventional cytogenetics and fluorescence in situ hubridization in persistent cytopenias and myelodysplastic syndromes in childhood. Anticancer Research, 24 (6): 3945-3949.

Tsangaris, G.T., Weitzdörfer, R., Pollak, D., Lubec, G. and Fountoulakis, M. (2005).The amniotic fluid cell proteome. Electrophοresis, 26 (6): 1168-1173.

Fountoulakis, M., Soumaka, E., Rapti, K., Mavroidis, M., Tsangaris, G.T., Maris, A., Weisleder, N. and Capetanaki, Y. (2005). Alterations in the heart mitochondrial proteome in a desmin null heart failure model. Journal of Molecular and Cellular Cardiology, 38 (3): 461-474.

Fountoulakis, M., Tsangaris, G.T., Maris, A. and Lubec, G. (2005). The rat brain hippocampus proteome. Journal of Chromatography B, 819 (1):115-129.
Anagnostopoulos, A.K., Vougas, K., Kolialexi, A.,  Mavrou, A., Fountoulakis, M. and Tsangaris, G.T. (2005). The Protein profile of the Human Immature T-cell CCRF-CEM. Cancer Genomics and Proteomics, 2 (5): 271-300.

Tsangaris, G.T.,  Kolialexi, A., Karamessinis, P., Anagnostopoulos, A., Antsaklis, A., Fountoulakis, M. and Mavrou, A. (2006). The normal human amniotic fluid supernatant proteome. IN VIVO, 20 (4): 479-490.

Tsangaris, G.T.,  Karamessinis, P., Kolialexi, A., Garbis, S.D., Antsaklis, A., Mavrou, A. and  Fountoulakis, M. (2006). Proteomic analysis of amniotic fluid in pregnancies with Down Syndrome. Proteomics, 6 (15): 4410-4419.

Kolialexi, A., Kitsiou, S., Fryssira, H., Sofocleous, C., Kouvidi, E., Tsangaris, G.T., Salavoura, K. and Mavrou  A. (2006). Identification of autosomal supernumery chromosome markers (SMCs) by fluorescent in situ hybridization (FISH). IN VIVO, 20 (4): 478-478.

Niforou, K.N., Anagnostopoulos, A.K., Vougas, K., Kittas, C., Gorgoulis, V.G. and Tsangaris, G.T. (2006). The proteome profile of the human osteosarcoma SAOS2 cell line. Cancer Genomics and Proteomics, 3 (5): 325-346.

Floros, X.E., Spyrou, G.M., Vougas, K., Tsangaris, G.T. and Nikita, K.S. (2006). Study on preprocessing and classifying mass spectral raw data concerning human normal and disease cases. Lecture Notes in Computer Science, Lecture Notes in Bioinformatics, 4345: 390-401.

Kolialexi, A., Tsangaris, G.T., Anagnostopoulos, A., Chondros, D., Bagiokos, V., Kitsiou, S., Kanavakis, E. and Mavrou, A. (2007). Two-way trafficking of Annexin V positive cells between mother and fetus: determination of apoptosis at delivery.  Prenatal Diagnosis, 27 (4): 348-351.

Niforou, K.N., Anagnostopoulos, A.K., Vougas, K., Kittas, C., Gorgoulis, V.G. and Tsangaris, G.T. (2008).The proteome profile of the human osteosarcoma U2Os cell line. Cancer Genomics and Proteomics, 5 (1): 63-78.

Mavrou, A., Anagnostopoulos, A., Kolialexi, A., Vougas, K., Papantoniou, N., Antsaklis, A., Fountoulakis, M. and Tsangaris, G.T. (2008). Proteomic analysis of amniotic fluid in pregnancies with Turner syndrome fetuses. Journal of Proteome Research, 7 (5):1862-1866.

Kolialexi, A., Tsangaris, G.T., Papantoniou, N., Anagnostopoulos, A.K., Vougas, K., Bagiokos, V., Antsaklis, A. and Mavrou, A. (2008). Application of proteomics for the identification of differentially expressed protein markers for Down syndrome in maternal plasma. Prenatal Diagnosis, 28 (8): 691-698.

Dimas, K., Tsimpouli, C., Anagnostopoulos, A.K., Mahaira, L., Iliopoulou, E., Perez, S., Vougas, K. and Tsangaris, G.T. (2008). The proteome profile of two cell lines and their corresponding xenografts isolated from a patient with clear cell sarcoma (soft tissue melanoma). Cancer Genomics and Proteomics, 5 (3-4): 175-238.

Vretou, E., Katsiki, E., Psarrou, E., Vougas, K. and Tsangaris, G.T. (2008). Identification and characterization of the Inc766 an inclusion membrane protein in Chlamydophila abortus-infected cells. Microbial Pathogenesis, 45 (4):265-272.

Alexandridou, A., Tsangaris G.T., Vougas, K., Nikita, K. and Spyrou G (2008). Peptide Finder: Mapping measured molecular masses to peptides and proteins. Bioinformatics, 24 (19): 2267-2269.

Sofocleous, C., Kitsiou, S., Fryssira, H., Kolialexi, A., Kalaitzidaki, M., Roma, E., Tsangaris, G.T., Chistofidou, C., Metaxotou, C., Kanavakis, E., Mavrou, A (2008). 10 years' experience in fragile X testing among mentally retarded individuals in Greece: a molecular and epidemiological approach. In Vivo, 22 (4): 451- 455.

Liontos, M., Niforou, K., Velimezi, G., Vougas, K., Evangelou, K., Apostolopoulou, K., Vrtel, R., Damalas, A., Kontovazenitis, P., Kotsinas, A., Zoumpourlis, V., Tsangaris, G.T., Kittas, C., Ginsberg, D., Halazonetis, T.D., Bartek, J., Gorgoulis, V.G., (2009). Modulation of the E2F1-driven cancer cell fate by the DNA damage response machinery and potential novel E2F1 targets in osteosarcomas. American Journal of Pathology 175(1):376-391.

Alexandridou A, Tsangaris GT, Vougas K, Nikita K, Spyrou G. (2009). UniMaP: Finding Unique Mass and Peptide signatures in the Human Proteome. Bioinformatics,  25(22): 3035-3057.

Vougas K, Samara A, Spyrou G and Tsangaris GT (2009). Position dominant sequence elements in experimentally verified human promoters and their putative relation to cancer. Cancer Genomics and Proteomics, 6(6): 337-356.

Anagnostopoulos AK, Kolialexi A, Mavrou A, Vougas K, Papantoniou N, Antsaklis A, Kanavakis E, Fountoulakis M and Tsangaris GT (2010). Proteomic analysis of amniotic fluid in pregnancies with Klinefelter syndrome foetuses. Journal of  Proteomics, 73(5): 943-950.

Xanthopoulou AG, Anagnostopoulos D, Vougas K, Anagnostopoulos AK, Alexandridou A, Spyrou G, Siafaka-Kapadai A and Tsangaris GT (2010). A Two-dimensional Proteomic Profile of Tetrahymena thermophila Whole Cell Lysate. In Vivo. 24(4):443-456.

Kolialexi A, Anagnostopoulos AK, Papantoniou N, Vougas K, Antsaklis A, Fountoulakis M, Mavrou A and Tsangaris GT (2010). Potential biomarkers for Turner in maternal plasma: possibility for noninvasive prenatal diagnosis. Journal Proteome Research, 9(10): 5164-5170.

Braoudaki M, Tsangaris GT, Karamolegou K, Anagnostopoulos AK, Prodromou N, Tzortzatou-Stathopoulou F (2010).Proteomic profile of a therapy related acute myeloid leukemia following brain tumor. Leuk Lymphoma, 51(12):2306-2309.

Samara A, Vougas K, Papadopoulou A, Baloyianni N, Chroussos G and Tsangaris GT. (2011). Proteomics reveal hippocampal lateral asymmetry. Hippocampus, 21(1): 108-119.

Braoudaki M, Tzortzatou-Stathopoulou F, Anagnostopoulos AK, Papathanassiou C, Vougas K, Karamolegou K and Tsangaris GT (2011). Proteomic analysis of childhood de novo acute myeloid leukemia and myelodysplastic syndrome/AML: correlation to molecular and cytogenetic analyses. Amino Acids, 40(3): 943-951.

Anagnostopoulos AK, Dimas KS, Papathanassiou C, Braoudaki M, Anastasiadou E, Vougas K, Karamolegou K, Kontos H, Prodromou N, Tzortzatou-Stathopoulou F, Tsangaris GT (2011) Proteomics studies of childhood pilocytic astrocytoma. Journal Proteome Research  10(5):2555-2565.

Tounta G, Vrettou C, Kolialexi A, Papantoniou N, Destouni A, Tsangaris GT, Antsaklis A, Kanavakis E, Mavrou A (2011). A Multiplex PCR for Non-invasive Fetal RHD Genotyping Using Cell-free Fetal DNA. In Vivo, 25(3):411-417.

Alexandridou A, Dovrolis N, Tsangaris GT, Nikita K, Spyrou G (2011). PepServe: a web server for peptide analysis, clustering and visualization. Nucleic Acids Research, 39(WSi): W381-384.

Xanthopoulou AG, Anagnostopoulos AK, Thanasopoulou A, Anastasiadou E, Sifakis S, Siafaka-Kapadai A , Tsangaris GT (2011). The proteome of normal human chorionic villus sampling cells. In Vivo, 25(6): 945-961.

Thanasopoulou A, Xanthopoulou AG, Anagnostopoulos AK, Konstantakou EG, Margaritis LH, Papassideri IS, Stravopodis DJ, Tsangaris GT, Anastasiadou E (2012).  Silencing of CCDC6 reduces the expression of 14-3-3σ in colorectal carcinoma cells. Anticancer Research 32(3):907-913.

Fragopoulou AF, Samara A, Antonelou MH, Xanthopoulou A, Papadopoulou A, Vougas K, Koutsogiannopoulou E, Anastasiadou E, Stravopodis DJ, Tsangaris GT, Margaritis LH (2012). Brain proteome response following whole body exposure of mice to mobile phone or wireless DECT base radiation. Electromagnetic Biology and Medicine, in press.